STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM15917.1Hypothetical protein. (117 aa)    
Predicted Functional Partners:
KRM15918.1
Hypothetical protein.
       0.793
KRM15921.1
HK97 family phage portal protein.
       0.793
KRM15919.1
Phage-related major head protein.
       0.788
KRM15920.1
Protease.
       0.779
KRM15914.1
Hypothetical protein.
       0.588
KRM15915.1
Hypothetical protein.
       0.588
KRM15916.1
Hypothetical protein.
       0.588
KRM15913.1
Hypothetical protein.
       0.558
KRM15922.1
Phage terminase, large subunit.
       0.480
KRM15910.1
Hypothetical protein.
       0.479
Your Current Organism:
Lactobacillus nantensis
NCBI taxonomy Id: 1423774
Other names: L. nantensis DSM 16982, Lactobacillus nantensis DSM 16982
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.