STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM18498.1DegV family protein. (280 aa)    
Predicted Functional Partners:
KRM17954.1
Dihydroacetone kinase.
 0.997
KRM18500.1
Extracellular protein precursor.
  
  
 0.659
KRM18499.1
Lysophospholipase l1-like esterase.
     
 0.645
KRM17953.1
General stress protein.
 
    0.628
KRM18497.1
Hemolysin III.
 
     0.584
KRM18501.1
Hypothetical protein; Belongs to the UPF0346 family.
       0.575
rnhB
Ribonuclease HII (RNase HII); Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
    0.536
KRM18502.1
GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.522
dinG
DnaQ family exonuclease DinG family helicase; 3'-5' exonuclease.
  
    0.428
Your Current Organism:
Lactobacillus nantensis
NCBI taxonomy Id: 1423774
Other names: L. nantensis DSM 16982, Lactobacillus nantensis DSM 16982
Server load: low (22%) [HD]