STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM14990.1ABC-type multidrug transport system, permease component. (258 aa)    
Predicted Functional Partners:
KRM14989.1
ABC-type multidrug transport system, ATPase component.
 
 0.984
KRM14988.1
Transcriptional regulator.
 
    0.867
KRM16052.1
Integral membrane protein.
  
 
  0.859
KRM16797.1
Hypothetical protein.
 
 0.835
KRM16084.1
ABC-type multidrug transport system, ATPase component.
 
 0.732
KRM15806.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
 0.645
KRM15808.1
ABC transporter ATPase.
 
 
 0.589
KRM18672.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
 
 0.576
KRM17779.1
ABC transporter ATPase component.
 
 
 0.574
KRM14934.1
ABC-type cobalt transport system, ATPase component.
  
 
 0.571
Your Current Organism:
Lactobacillus nantensis
NCBI taxonomy Id: 1423774
Other names: L. nantensis DSM 16982, Lactobacillus nantensis DSM 16982
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.