STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM14925.1Immunity protein PlnI. (234 aa)    
Predicted Functional Partners:
KRM18696.1
Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
  
 
   0.852
KRM18404.1
Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
  
 
   0.852
KRM17369.1
ABC-type Na+ efflux pump, permease.
 
 
  0.685
KRM17582.1
Hypothetical protein.
 
     0.662
KRM14927.1
Sodium hydrogen exchanger.
  
    0.656
KRM17182.1
Regulatory protein MarR.
 
     0.624
KRM14926.1
Hypothetical membrane protein, duf1211 family.
       0.605
KRM17692.1
Hypothetical protein.
 
     0.577
KRM14928.1
Hypothetical protein.
 
     0.549
KRM18236.1
Putative membrane spanning protein.
 
     0.525
Your Current Organism:
Lactobacillus nantensis
NCBI taxonomy Id: 1423774
Other names: L. nantensis DSM 16982, Lactobacillus nantensis DSM 16982
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.