STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM17843.1Integral membrane protein. (515 aa)    
Predicted Functional Partners:
KRM17844.1
6-pyruvoyl-tetrahydropterin synthase.
 
     0.950
KRM17845.1
Glycosyltransferase.
 
  
 0.946
KRM17846.1
Exosortase.
 
    0.945
KRM17847.1
Hypothetical protein.
 
     0.928
KRM15278.1
Hypothetical protein.
  
  
 0.496
KRM18027.1
Hypothetical protein.
  
    0.487
KRM16399.1
Hypothetical protein.
 
  
 0.484
KRM17842.1
Formate nitrite transporter family protein.
       0.482
KRM17848.1
Hypothetical protein.
       0.471
KRM16792.1
Esterase family protein.
    
  0.450
Your Current Organism:
Lactobacillus nantensis
NCBI taxonomy Id: 1423774
Other names: L. nantensis DSM 16982, Lactobacillus nantensis DSM 16982
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.