STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM17622.1MarR family transcriptional regulator. (147 aa)    
Predicted Functional Partners:
KRM17209.1
Sucrose PTS, EIIBCA.
   
 
 0.863
KRM17192.1
Beta-glucosides PTS, EIIABC.
   
 
 0.863
KRM18055.1
N-acetylglucosamine and glucose PTS, EIICBA.
   
 
 0.863
KRM14374.1
Beta-glucosides PTS, EIIABC.
   
 
 0.863
KRM18695.1
Hypothetical protein; Belongs to the HesB/IscA family.
   
    0.532
KRM16793.1
PTS system sucrose-specific IIBC component.
     
 0.454
KRM15056.1
Pts systemtrehalose-specific iib component.
     
 0.454
KRM17623.1
Hypothetical protein.
       0.447
KRM18555.1
Bifunctional glycosyltransferase transpeptidase penicillin-binding protein 1A.
      
 0.414
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
      
 0.414
Your Current Organism:
Lactobacillus nantensis
NCBI taxonomy Id: 1423774
Other names: L. nantensis DSM 16982, Lactobacillus nantensis DSM 16982
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.