STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK79907.1Hypothetical protein. (814 aa)    
Predicted Functional Partners:
KRK79906.1
Hypothetical protein.
 
 
 0.976
KRK79908.1
Metal-dependent phosphohydrolase.
  
    0.867
KRK79905.1
Hypothetical protein; Belongs to the UPF0342 family.
 
     0.787
KRK79904.1
Bifunctional glycolsyltransferase transpeptidase penicillin binding protein 2A.
       0.743
KRK80662.1
Hydrolase.
  
    0.554
KRK79404.1
Carboxylesterase.
  
     0.516
KRK79866.1
5-nucleotidase 2,3-cyclic phosphodiesterase related esterase; Belongs to the 5'-nucleotidase family.
  
     0.513
KRK79903.1
Pseudouridine synthase.
       0.455
KRK80315.1
Hypothetical protein.
  
     0.447
KRK79638.1
Lipoate-protein ligase A.
  
     0.434
Your Current Organism:
Lactobacillus nodensis
NCBI taxonomy Id: 1423775
Other names: L. nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis DSM 19682, Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis JCM 14932, Lactobacillus nodensis NBRC 107160
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.