STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK79767.1Hypothetical protein. (224 aa)    
Predicted Functional Partners:
KRK79765.1
Hypothetical protein.
  
 
 0.940
KRK79766.1
Hypothetical protein.
 
  
 0.821
KRK79769.1
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
  
 0.786
KRK79759.1
Hypothetical protein.
 
  
 0.785
KRK79768.1
Acetaldehyde dehydrogenase (acetylating).
  
    0.753
KRK79763.1
Ethanolamine utilization protein EutJ.
 
    0.697
KRK79770.1
Hypothetical protein.
 
   
0.666
KRK79760.1
Hypothetical protein.
  
  
 0.590
KRK79764.1
Hypothetical protein.
       0.589
KRK79762.1
Hypothetical protein.
  
    0.555
Your Current Organism:
Lactobacillus nodensis
NCBI taxonomy Id: 1423775
Other names: L. nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis DSM 19682, Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis JCM 14932, Lactobacillus nodensis NBRC 107160
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.