STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK81122.1Transcription regulator. (236 aa)    
Predicted Functional Partners:
KRK80126.1
Beta-glucosides PTS, EIIABC.
  
 
 0.955
KRK79749.1
N-acetylglucosamine and glucose PTS, EIICBA.
  
 
 0.955
KRK78661.1
Beta-glucosides PTS, EIIABC.
  
 
 0.955
KRK81123.1
Glucokinase.
 
 
 0.790
nanE
N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
   
 0.763
KRK81119.1
Hypothetical protein.
 
     0.733
KRK81117.1
Transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.697
KRK80603.1
Fructose-specific phosphotransferase system, enzyme IIABC.
     
 0.643
nanA
N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate.
 
     0.637
KRK79825.1
Phosphomannose isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
  
 
 0.569
Your Current Organism:
Lactobacillus nodensis
NCBI taxonomy Id: 1423775
Other names: L. nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis DSM 19682, Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis JCM 14932, Lactobacillus nodensis NBRC 107160
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.