STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK81307.1ABC transporter periplasmic protein; Belongs to the bacterial solute-binding protein 3 family. (285 aa)    
Predicted Functional Partners:
KRK81308.1
ABC transporter.
 0.999
KRK79247.1
Amino acid ABC transporter permease component.
  0.990
KRK80168.1
Polar amino acid ABC transporter inner membrane subunit.
  0.986
KRK81305.1
Hypothetical protein.
 
 0.984
KRK79246.1
Amino acid ABC transporter ATP-binding protein.
 
 0.981
KRK81155.1
Phosphate ABC transporter ATP-binding protein.
 
 0.949
KRK81158.1
Glutamine ABC transporter, permease protein.
  0.930
KRK81157.1
Glutamine transport system permease protein.
  0.895
KRK79248.1
Amino acid ABC transporter substrate-binding component; Belongs to the bacterial solute-binding protein 3 family.
  
  
 
0.874
KRK81306.1
6-aminohexanoate-cyclic-dimer hydrolase; Belongs to the amidase family.
 
     0.869
Your Current Organism:
Lactobacillus nodensis
NCBI taxonomy Id: 1423775
Other names: L. nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis DSM 19682, Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis JCM 14932, Lactobacillus nodensis NBRC 107160
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