STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK80929.1OmpR family DNA-binding response regulator. (234 aa)    
Predicted Functional Partners:
KRK80928.1
Two-component system, sensor histidine kinase.
 0.998
KRK78695.1
Histidine protein kinase.
 0.971
KRK80998.1
Signal transduction histidine kinase.
  0.959
KRK79510.1
Integral membrane sensor signal transduction histidine kinase.
 0.947
KRK79349.1
Two component sensor transduction histidine kinase.
 0.947
KRK79720.1
Hypothetical protein.
 
 0.946
KRK79941.1
Histidine protein kinase.
 0.943
KRK79290.1
Sensor histidine kinase.
 0.931
KRK80590.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.828
KRK80053.1
ATPase histidine kinase DNA gyrase B HSP90 domain protein.
 
  0.759
Your Current Organism:
Lactobacillus nodensis
NCBI taxonomy Id: 1423775
Other names: L. nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis DSM 19682, Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis JCM 14932, Lactobacillus nodensis NBRC 107160
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.