STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK80983.1lacY protein. (407 aa)    
Predicted Functional Partners:
KRK80982.1
Hypothetical protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 0.962
KRK80072.1
Nitrate reductase gamma subunit.
  
 
 0.779
KRK80069.1
Nitrate reductase, alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.621
KRK80071.1
Nitrate reductase molybdenum cofactor assembly chaperone.
  
  
 0.604
KRK80070.1
Nitrate reductase, beta chain.
    
 0.601
KRK80984.1
Hypothetical protein.
 
     0.562
KRK79192.1
Bilirubin oxidase.
    
 0.561
KRK80077.1
Hypothetical protein.
  
 
  0.513
KRK79373.1
Hypothetical protein.
  
     0.502
KRK79961.1
Carboxylesterase; Belongs to the type-B carboxylesterase/lipase family.
 
  
  0.499
Your Current Organism:
Lactobacillus nodensis
NCBI taxonomy Id: 1423775
Other names: L. nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis DSM 19682, Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis JCM 14932, Lactobacillus nodensis NBRC 107160
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.