STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK81021.1Cytochrome D ubiquinol oxidase subunit I. (448 aa)    
Predicted Functional Partners:
KRK81022.1
Cytochrome d ubiquinol oxidase subunit II.
 
 0.999
KRK81023.1
Transport ATP-binding protein CydC.
  
 0.995
KRK81024.1
Cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component.
  
 0.991
KRK81034.1
Pyridine nucleotide-disulfide oxidoreductase.
 
   
 0.774
KRK81027.1
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
     0.693
KRK79277.1
Phosphocarrier protein HPr.
      
 0.549
KRK79902.1
Prenyltransferase.
 
     0.548
KRK81026.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
     0.547
KRK81025.1
Hypothetical protein.
       0.474
dinG
DnaQ family exonuclease DinG family helicase; 3'-5' exonuclease.
      
 0.469
Your Current Organism:
Lactobacillus nodensis
NCBI taxonomy Id: 1423775
Other names: L. nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis DSM 19682, Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis JCM 14932, Lactobacillus nodensis NBRC 107160
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.