STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK78870.1Ascorbate-specific PTS system enzyme IIC. (419 aa)    
Predicted Functional Partners:
KRK78869.1
Hypothetical protein.
 
 
 0.978
KRK78868.1
Phosphotransferase system mannitol fructose-specific IIA domain containing protein.
 
 
 0.957
KRK79277.1
Phosphocarrier protein HPr.
    
 0.919
KRK78873.1
Transcriptional antiterminator.
 
     0.902
KRK80603.1
Fructose-specific phosphotransferase system, enzyme IIABC.
  
 
 0.781
KRK78871.1
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
     0.719
KRK78872.1
2-keto-3-deoxy-6-phospho-gluconate aldolase.
 
    0.715
KRK79224.1
NADH oxidase.
   
    0.685
KRK80126.1
Beta-glucosides PTS, EIIABC.
 
  
 0.668
KRK78661.1
Beta-glucosides PTS, EIIABC.
 
  
 0.662
Your Current Organism:
Lactobacillus nodensis
NCBI taxonomy Id: 1423775
Other names: L. nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis DSM 19682, Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis JCM 14932, Lactobacillus nodensis NBRC 107160
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.