STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK79178.1Cellobiose PTS, EIIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. (449 aa)    
Predicted Functional Partners:
KRK80626.1
Cellobiose-specific PTS system IIA component.
 
 
 0.996
KRK80627.1
Hypothetical protein.
 
 
 0.989
KRK81184.1
Glycosyl hydrolase 1 family protein; Belongs to the glycosyl hydrolase 1 family.
 
 
 0.980
KRK79277.1
Phosphocarrier protein HPr.
    
  0.918
KRK79177.1
Extracellular lipase esterase precursor.
 
     0.907
KRK78661.1
Beta-glucosides PTS, EIIABC.
  
  
 0.779
KRK80126.1
Beta-glucosides PTS, EIIABC.
  
  
 0.765
KRK80603.1
Fructose-specific phosphotransferase system, enzyme IIABC.
  
  
 0.729
KRK80805.1
Hypothetical protein.
 
  
 0.653
KRK79749.1
N-acetylglucosamine and glucose PTS, EIICBA.
   
  
 0.584
Your Current Organism:
Lactobacillus nodensis
NCBI taxonomy Id: 1423775
Other names: L. nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis DSM 19682, Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis JCM 14932, Lactobacillus nodensis NBRC 107160
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