STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK80672.1Hypothetical protein. (90 aa)    
Predicted Functional Partners:
KRK80671.1
Putative N6-adenine-specific methylase (putative).
  
    0.916
KRK80669.1
Lipoprotein precursor.
       0.865
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.865
KRK80673.1
Cell division membrane protein; Belongs to the SEDS family.
       0.843
KRK80667.1
Type II secretion competence system, protein ComEC-like.
       0.757
KRK80666.1
DNA polymerase III subunit delta.
       0.754
KRK80668.1
Competence protein CelA.
       0.754
KRK80674.1
GTP-binding protein TypA.
       0.634
KRK80701.1
Hypothetical protein.
  
     0.521
KRK80841.1
Hypothetical protein.
  
     0.450
Your Current Organism:
Lactobacillus nodensis
NCBI taxonomy Id: 1423775
Other names: L. nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis DSM 19682, Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis JCM 14932, Lactobacillus nodensis NBRC 107160
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