STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK78548.1Hypothetical protein. (224 aa)    
Predicted Functional Partners:
KRK78549.1
Hypothetical protein.
 
    0.856
KRK78600.1
Extracellular protein.
  
     0.663
KRK80832.1
Hypothetical protein.
  
     0.655
KRK81213.1
Cell surface SD repeat-containing protein.
  
     0.639
KRK78735.1
Carboxylesterase protein; Belongs to the type-B carboxylesterase/lipase family.
  
     0.639
KRK78547.1
Cation efflux transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
     0.623
KRK78601.1
Extracellular protein.
  
     0.623
KRK78678.1
Hypothetical protein.
  
     0.592
KRK79307.1
Hypothetical protein.
  
     0.585
KRK78587.1
Transcriptional regulator.
  
     0.574
Your Current Organism:
Lactobacillus nodensis
NCBI taxonomy Id: 1423775
Other names: L. nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis DSM 19682, Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160, Lactobacillus nodensis JCM 14932, Lactobacillus nodensis NBRC 107160
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.