STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK98644.1Lipoprotein. (297 aa)    
Predicted Functional Partners:
KRK98909.1
Extracellular protein.
  
     0.771
KRK98858.1
Hypothetical protein.
  
     0.761
KRK96898.1
Hypothetical protein.
  
     0.761
KRK98745.1
Hypothetical protein.
  
     0.747
KRK99677.1
Hypothetical protein.
  
     0.728
KRK97369.1
Hypothetical protein.
  
     0.718
KRK97073.1
Hypothetical protein.
  
     0.698
KRK99685.1
Hypothetical protein.
  
     0.695
KRK99692.1
Integral membrane protein.
 
     0.694
KRK96954.1
Hypothetical protein.
  
     0.686
Your Current Organism:
Lactobacillus odoratitofui
NCBI taxonomy Id: 1423776
Other names: L. odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui DSM 19909, Lactobacillus odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui JCM 15043, Lactobacillus odoratitofui JCM 15043 = DSM 19909, Lactobacillus sp. YIT 11304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.