STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK97755.1ATPase histidine kinase DNA gyrase B HSP90 domain protein. (342 aa)    
Predicted Functional Partners:
KRK97754.1
Response regulator.
 
  0.993
KRK98876.1
Response regulator.
 
  0.975
KRK97756.1
Hypothetical protein.
 
 
   0.924
KRK98538.1
Chemotaxis protein CheY.
 
  0.909
KRK97758.1
Molybdopterin-guanine dinucleotide biosynthesis protein A family protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
 
    0.862
KRK97044.1
Hypothetical protein.
   
 0.851
KRK98125.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
  0.774
KRK97762.1
Molybdopterin biosynthesis protein MoeB.
 
  
 0.718
KRK97777.1
Iron chelating abc transporter.
  
     0.696
KRK98255.1
Acetoin pyruvate dehydrogenase complex, E2 component, dihydrolipoamide succinyltransferase.
    
 0.669
Your Current Organism:
Lactobacillus odoratitofui
NCBI taxonomy Id: 1423776
Other names: L. odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui DSM 19909, Lactobacillus odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui JCM 15043, Lactobacillus odoratitofui JCM 15043 = DSM 19909, Lactobacillus sp. YIT 11304
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