STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK97949.1Cell division protein FtsI. (697 aa)    
Predicted Functional Partners:
KRK99440.1
Cell division membrane protein; Belongs to the SEDS family.
 
 
 0.953
KRK98307.1
Cell division protein FtsI.
  
  
0.932
KRK99413.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.932
KRK98043.1
Membrane carboxypeptidase (penicillin-binding protein).
 
 
 0.911
divIB
Cell division septal protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
 
 
 0.888
KRK98250.1
Cell division protein FtsW; Belongs to the SEDS family.
 
 
 0.878
KRK97894.1
Membrane carboxypeptidase (penicillin-binding protein).
 
 
 0.844
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
 
 0.697
KRK98039.1
Hypothetical protein.
  
     0.682
KRK98002.1
Serine threonine kinase.
  
 
 0.675
Your Current Organism:
Lactobacillus odoratitofui
NCBI taxonomy Id: 1423776
Other names: L. odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui DSM 19909, Lactobacillus odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui JCM 15043, Lactobacillus odoratitofui JCM 15043 = DSM 19909, Lactobacillus sp. YIT 11304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.