STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK98050.1Immunity protein PlnI. (222 aa)    
Predicted Functional Partners:
KRK99894.1
Hypothetical protein.
  
     0.761
KRK97805.1
Hypothetical protein.
  
     0.728
KRK98665.1
Hypothetical protein.
  
     0.726
KRK99689.1
Hypothetical protein.
  
     0.702
KRK98588.1
Hypothetical protein.
  
     0.695
KRK98909.1
Extracellular protein.
  
     0.691
KRK98853.1
Hypothetical protein.
  
     0.690
KRK98054.1
Hypothetical protein.
  
     0.676
KRK96946.1
Hypothetical protein.
  
     0.662
KRK99685.1
Hypothetical protein.
  
     0.613
Your Current Organism:
Lactobacillus odoratitofui
NCBI taxonomy Id: 1423776
Other names: L. odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui DSM 19909, Lactobacillus odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui JCM 15043, Lactobacillus odoratitofui JCM 15043 = DSM 19909, Lactobacillus sp. YIT 11304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.