Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRK98110.1 | KRK98111.1 | FD04_GL001088 | FD04_GL001089 | TPR repeat-containing protein. | Nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.636 |
| KRK98110.1 | KRK98113.1 | FD04_GL001088 | FD04_GL001091 | TPR repeat-containing protein. | 30S ribosomal protein S1. | 0.407 |
| KRK98110.1 | polA | FD04_GL001088 | FD04_GL000886 | TPR repeat-containing protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.420 |
| KRK98111.1 | KRK98110.1 | FD04_GL001089 | FD04_GL001088 | Nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | TPR repeat-containing protein. | 0.636 |
| KRK98111.1 | KRK98113.1 | FD04_GL001089 | FD04_GL001091 | Nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S1. | 0.600 |
| KRK98111.1 | KRK98295.1 | FD04_GL001089 | FD04_GL001276 | Nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein. | 0.609 |
| KRK98111.1 | cas1 | FD04_GL001089 | FD04_GL001340 | Nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Crispr-associated protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. | 0.693 |
| KRK98111.1 | der | FD04_GL001089 | FD04_GL001090 | Nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.840 |
| KRK98111.1 | dnaA | FD04_GL001089 | FD04_GL002417 | Nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.677 |
| KRK98111.1 | nusA | FD04_GL001089 | FD04_GL001170 | Nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.590 |
| KRK98111.1 | polA | FD04_GL001089 | FD04_GL000886 | Nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.581 |
| KRK98111.1 | rpsO | FD04_GL001089 | FD04_GL001220 | Nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | rpsO protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.604 |
| KRK98111.1 | rpsT | FD04_GL001089 | FD04_GL001221 | Nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein; Binds directly to 16S ribosomal RNA. | 0.665 |
| KRK98113.1 | KRK98110.1 | FD04_GL001091 | FD04_GL001088 | 30S ribosomal protein S1. | TPR repeat-containing protein. | 0.407 |
| KRK98113.1 | KRK98111.1 | FD04_GL001091 | FD04_GL001089 | 30S ribosomal protein S1. | Nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.600 |
| KRK98113.1 | der | FD04_GL001091 | FD04_GL001090 | 30S ribosomal protein S1. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.680 |
| KRK98113.1 | nusA | FD04_GL001091 | FD04_GL001170 | 30S ribosomal protein S1. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.877 |
| KRK98113.1 | polA | FD04_GL001091 | FD04_GL000886 | 30S ribosomal protein S1. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.704 |
| KRK98113.1 | rpsO | FD04_GL001091 | FD04_GL001220 | 30S ribosomal protein S1. | rpsO protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.985 |
| KRK98113.1 | rpsT | FD04_GL001091 | FD04_GL001221 | 30S ribosomal protein S1. | Hypothetical protein; Binds directly to 16S ribosomal RNA. | 0.856 |
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