STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK97461.1Abc-type amino acid transport system, periplasmic component. (266 aa)    
Predicted Functional Partners:
KRK97460.1
Abc-type amino acid transport system, permease component.
 0.989
KRK96888.1
Polar amino acid ABC transporter inner membrane subunit.
 0.978
KRK97459.1
Abc-type polar amino acid transport system, atpase component.
 
 0.958
KRK99409.1
ABC-type amino acid transport system, permease component.
  0.957
KRK97023.1
Polar amino acid ABC transporter inner membrane subunit.
 
  0.899
KRK97024.1
Glutamine ABC transporter membrane protein.
 
  0.851
KRK97405.1
Phosphonate-transporting ATPase.
 
 0.834
KRK98227.1
Phosphonate-transporting ATPase.
 
 0.825
KRK97021.1
ABC-type polar amino acid transport system, ATPase component.
 
 0.807
KRK99408.1
Glutamine ABC transporter, ATP-binding protein.
 
 0.707
Your Current Organism:
Lactobacillus odoratitofui
NCBI taxonomy Id: 1423776
Other names: L. odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui DSM 19909, Lactobacillus odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui JCM 15043, Lactobacillus odoratitofui JCM 15043 = DSM 19909, Lactobacillus sp. YIT 11304
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