STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK96988.1Hypothetical protein. (340 aa)    
Predicted Functional Partners:
KRK98762.1
Hypothetical protein.
  
     0.768
KRK99836.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.758
KRK96989.1
Thioredoxin reductase.
       0.752
KRK98806.1
Transcriptional regulator.
  
     0.740
KRK98673.1
S-layer protein.
  
     0.732
KRK97881.1
Cell surface protein.
  
     0.724
KRK99491.1
Muramidase (flagellum-specific).
  
     0.721
KRK99677.1
Hypothetical protein.
  
     0.690
KRK98637.1
D-alanyl-D-alanine carboxypeptidase.
  
     0.685
KRK98853.1
Hypothetical protein.
  
     0.684
Your Current Organism:
Lactobacillus odoratitofui
NCBI taxonomy Id: 1423776
Other names: L. odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui DSM 19909, Lactobacillus odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui JCM 15043, Lactobacillus odoratitofui JCM 15043 = DSM 19909, Lactobacillus sp. YIT 11304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.