STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK99626.1ABC-type oligopeptide transport system, periplasmic component. (537 aa)    
Predicted Functional Partners:
KRK97028.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 0.958
KRK97029.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 0.955
KRK97030.1
ABC-type dipeptide oligopeptide nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.927
KRK97031.1
ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
 
 
  0.918
KRK98523.1
Putative pheromone binding protein.
  
  
 
0.706
KRK97846.1
ABC transporter, substrate-binding protein, family 5.
  
  
 
0.658
KRK97522.1
Oligopeptide ABC transporter substrate binding protein.
  
  
 
0.519
KRK97026.1
Oligopeptide ABC transporter substrate binding protein.
  
  
 
0.510
KRK97391.1
Oligopeptide ABC superfamily ATP binding cassette transporter, substrate binding protein.
  
  
 
0.508
KRK97027.1
ABC-type oligopeptide transport system, periplasmic component.
  
  
 
0.507
Your Current Organism:
Lactobacillus odoratitofui
NCBI taxonomy Id: 1423776
Other names: L. odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui DSM 19909, Lactobacillus odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui JCM 15043, Lactobacillus odoratitofui JCM 15043 = DSM 19909, Lactobacillus sp. YIT 11304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.