STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL03977.1ComG operon protein 2. (345 aa)    
Predicted Functional Partners:
KRL03976.1
ComG operon protein 1.
 
 0.998
KRL03978.1
Hypothetical protein.
 
  
 0.984
KRL03979.1
Hypothetical protein.
  
  
 0.979
KRL04633.1
ComE operon protein 3.
 
  
 0.898
KRL04635.1
ComE operon protein 1.
  
  
 0.809
KRL04074.1
Hypothetical protein.
 
  
 0.801
KRL03983.1
Adenine-specific DNA methylase.
 
     0.712
KRL04846.1
ComF operon protein 1.
  
  
 0.699
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
       0.668
KRL03980.1
Hypothetical protein.
       0.648
Your Current Organism:
Lactobacillus oeni
NCBI taxonomy Id: 1423777
Other names: L. oeni DSM 19972, Lactobacillus oeni DSM 19972
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.