STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL05165.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
KRL05167.1
Hypothetical protein.
 
     0.915
KRL05166.1
Hypothetical protein.
       0.660
KRL05332.1
Hypothetical protein.
 
    0.591
KRL05699.1
Hypothetical protein.
 
    0.564
KRL05083.1
Hypothetical protein.
  
     0.509
KRL04288.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
 
     0.506
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
      
 0.442
KRL05700.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
 
     0.429
KRL05168.1
Hydrolase, alpha beta domain protein.
       0.419
KRL04426.1
Hypothetical protein.
  
     0.416
Your Current Organism:
Lactobacillus oeni
NCBI taxonomy Id: 1423777
Other names: L. oeni DSM 19972, Lactobacillus oeni DSM 19972
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.