STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL05004.1Hypothetical protein. (179 aa)    
Predicted Functional Partners:
KRL04835.1
Hypothetical protein.
  
    0.860
KRL05113.1
Hypothetical protein.
  
  
 0.632
KRL05003.1
Thioredoxin; Belongs to the thioredoxin family.
       0.551
KRL04180.1
Hypothetical protein.
  
    0.530
KRL05641.1
Sensor histidine kinase.
   
   0.511
KRL04839.1
Hypothetical protein.
  
  
 0.508
KRL05827.1
Endopeptidase.
  
  
 0.507
KRL04243.1
Hypothetical protein.
  
     0.502
KRL03946.1
Two component system histidine kinase.
   
   0.486
KRL05129.1
Signal transduction histidine kinase.
   
   0.473
Your Current Organism:
Lactobacillus oeni
NCBI taxonomy Id: 1423777
Other names: L. oeni DSM 19972, Lactobacillus oeni DSM 19972
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.