STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL04639.1Hypothetical protein. (101 aa)    
Predicted Functional Partners:
KRL04638.1
Methyltransferase.
  
    0.915
KRL04636.1
ATP-dependent protease La.
       0.848
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.848
KRL04641.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
       0.805
KRL04640.1
Hypothetical protein.
       0.786
KRL03988.1
Hypothetical protein.
  
     0.733
KRL04642.1
Cell division protein; Belongs to the SEDS family.
       0.732
KRL04635.1
ComE operon protein 1.
       0.632
KRL04633.1
ComE operon protein 3.
       0.554
KRL05974.1
Hypothetical protein.
  
     0.536
Your Current Organism:
Lactobacillus oeni
NCBI taxonomy Id: 1423777
Other names: L. oeni DSM 19972, Lactobacillus oeni DSM 19972
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