STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL04720.1Penicillin-binding protein. (686 aa)    
Predicted Functional Partners:
KRL04173.1
Rod shape determining protein; Belongs to the SEDS family.
 
 
 0.960
divIB
Cell division protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
 
 
 0.944
KRL04673.1
Penicillin binding protein 2B.
 
  
0.940
KRL04200.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.913
KRL04618.1
Multimodular transpeptidase-transglycosylase PBP 1A.
 
 
 0.909
KRL04642.1
Cell division protein; Belongs to the SEDS family.
 
 
 0.902
KRL04774.1
Multimodular transpeptidase-transglycosylase PBP 2A.
 
 
 0.789
KRL04300.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.774
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
 
 0.773
KRL04701.1
Serine threonine protein kinase.
    
 0.754
Your Current Organism:
Lactobacillus oeni
NCBI taxonomy Id: 1423777
Other names: L. oeni DSM 19972, Lactobacillus oeni DSM 19972
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.