STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL56025.1Na+-driven multidrug efflux pump. (452 aa)    
Predicted Functional Partners:
KRL56024.1
Hypothetical protein.
       0.630
KRL57848.1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.616
KRL54823.1
30S ribosomal protein S1.
  
    0.600
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
     
 0.495
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.480
KRL54632.1
Acetoin pyruvate dehydrogenase complex, E2 component, dihydrolipoamide succinyltransferase.
    
 
 0.461
rplR
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
     
 0.442
Your Current Organism:
Lactobacillus oligofermentans
NCBI taxonomy Id: 1423778
Other names: L. oligofermentans DSM 15707 = LMG 22743, Lactobacillus oligofermentans AMKR18, Lactobacillus oligofermentans DSM 15707, Lactobacillus oligofermentans DSM 15707 = LMG 22743, Lactobacillus oligofermentans LMG 22743, Lactobacillus oligofermentans LMG 22743 = DSM 15707
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.