STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL55152.1Dihydropyrimidine dehydrogenase subunit A. (412 aa)    
Predicted Functional Partners:
KRL55151.1
Dihydropyrimidine dehydrogenase subunit B.
 0.999
pyrD
Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
 0.983
deoD
Purine nucleoside phosphorylase.
     
 0.927
KRL55504.1
Cytosine deaminase.
  
 
  0.927
KRL58018.1
Pyrimidine-nucleoside phosphorylase.
    
  0.920
KRL55451.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.902
KRL55153.1
Glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family.
    
 0.625
KRL55927.1
Glutamine synthetase.
  
 
 0.616
KRL55980.1
Histidine triad (HIT) protein.
   
 
 0.581
KRL55615.1
Oxidoreductase.
   
  0.578
Your Current Organism:
Lactobacillus oligofermentans
NCBI taxonomy Id: 1423778
Other names: L. oligofermentans DSM 15707 = LMG 22743, Lactobacillus oligofermentans AMKR18, Lactobacillus oligofermentans DSM 15707, Lactobacillus oligofermentans DSM 15707 = LMG 22743, Lactobacillus oligofermentans LMG 22743, Lactobacillus oligofermentans LMG 22743 = DSM 15707
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.