STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL54953.1Hypothetical protein. (120 aa)    
Predicted Functional Partners:
KRL54952.1
Hypothetical protein.
       0.806
KRL54950.1
Major tail protein.
       0.794
KRL54951.1
Hypothetical protein.
       0.789
KRL54954.1
Hypothetical protein.
       0.788
KRL54956.1
Phage capsid protein.
       0.675
KRL54949.1
Hypothetical protein.
       0.623
KRL54948.1
Hypothetical protein.
       0.592
KRL54955.1
Hypothetical protein.
       0.588
KRL54947.1
Hypothetical protein.
       0.543
KRL54957.1
Portal protein.
       0.542
Your Current Organism:
Lactobacillus oligofermentans
NCBI taxonomy Id: 1423778
Other names: L. oligofermentans DSM 15707 = LMG 22743, Lactobacillus oligofermentans AMKR18, Lactobacillus oligofermentans DSM 15707, Lactobacillus oligofermentans DSM 15707 = LMG 22743, Lactobacillus oligofermentans LMG 22743, Lactobacillus oligofermentans LMG 22743 = DSM 15707
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.