STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL10919.1Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate. (296 aa)    
Predicted Functional Partners:
KRL10920.1
Threonine synthase.
 
 0.999
KRL10921.1
Homoserine dehydrogenase.
 
 0.995
KRL10922.1
Aspartate kinase; Belongs to the aspartokinase family.
 
 0.912
purM
Phosphoribosylformylglycinamidine cyclo-ligase.
 
    
 0.903
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
    
 0.876
metE
5-methyltetrahydropteroyltriglutamate homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
   
 
 0.871
KRL09804.1
O-acetylhomoserine O-acetylserine sulfhydrylase.
    
  0.870
KRL10918.1
Hypothetical protein; Belongs to the UPF0735 family.
 
  
  0.867
KRL11600.1
Aspartate kinase; Belongs to the aspartokinase family.
 
 0.746
KRL08559.1
Branched-chain amino acid aminotransferase.
  
 
 0.745
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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