STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL10936.1Hypothetical protein. (205 aa)    
Predicted Functional Partners:
KRL09350.1
Hypothetical protein.
  
     0.676
KRL10422.1
ABC transporter, ATP-binding protein.
  
     0.567
KRL09417.1
Bleomycin resistance protein.
 
  
  0.565
KRL08949.1
Pyridoxamine 5-phosphate oxidase family protein.
  
     0.542
KRL10935.1
3-hydroxyacyl-CoA dehydrogenase.
       0.520
KRL10904.1
Hypothetical protein.
  
     0.496
KRL09366.1
Acyltransferase 3.
  
     0.476
KRL12133.1
Prephenate dehydratase.
  
     0.466
KRL09915.1
Acyltransferase 3.
  
     0.464
KRL10124.1
Mg2 transporter protein CorA family protein.
  
     0.435
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.