STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL10121.1Beta-galactosidase. (319 aa)    
Predicted Functional Partners:
KRL10122.1
Family 2 glycoside hydrolase.
 
 0.999
KRL11503.1
Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose.
  
 
 0.944
KRL09275.1
ROK family glucokinase.
     
 0.930
KRL10455.1
Alpha-galactosidase.
 
 
 0.928
KRL09878.1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.926
KRL12124.1
Hypothetical protein.
 
  
  0.918
KRL11566.1
Glucokinase.
     
 0.909
KRL12127.1
Melibiase subfamily protein.
  
 
 0.880
KRL10456.1
Sugar (glycoside-Pentoside-Hexuronide) transporter.
 
  
 0.790
KRL12018.1
Yhch yjgk yial family protein.
   
  0.699
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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