STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL10138.1Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family. (421 aa)    
Predicted Functional Partners:
KRL10104.1
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
 
  
 
0.946
KRL10295.1
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 
0.941
KRL09186.1
Penicillin-binding protein.
   
 
 0.934
KRL09332.1
Penicillin-binding protein.
   
 
 0.934
KRL10139.1
Integral membrane sensor signal transduction histidine kinase.
  
  
 0.858
KRL10140.1
Winged helix family two component transcriptional regulator.
  
  
 0.808
KRL10162.1
Periplasmic protease.
  
 
 0.805
KRL09117.1
Cell wall hydrolase autolysin.
   
 
 0.739
KRL09279.1
Penicillin-binding protein transpeptidase.
  
 
 0.681
KRL08541.1
Peptidoglycan glycosyltransferase.
  
 
 0.667
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.