STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL10140.1Winged helix family two component transcriptional regulator. (229 aa)    
Predicted Functional Partners:
KRL10139.1
Integral membrane sensor signal transduction histidine kinase.
 0.990
KRL08526.1
Integral membrane sensor signal transduction histidine kinase.
 0.964
KRL09439.1
Multi-sensor signal transduction histidine kinase.
 0.929
KRL08960.1
Integral membrane sensor signal transduction histidine kinase.
 0.897
KRL09294.1
Integral membrane sensor signal transduction histidine kinase.
 
  0.897
KRL11982.1
Multi-sensor signal transduction histidine kinase.
 0.881
KRL09142.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.838
KRL10138.1
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 0.808
KRL10878.1
Winged helix family transcriptional regulator.
  
  
  0.807
KRL09103.1
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
 
   
 0.756
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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