STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL10385.1Cytosine purines uracil thiamine allantoin permease; Belongs to the purine-cytosine permease (2.A.39) family. (457 aa)    
Predicted Functional Partners:
KRL10384.1
Pentapeptide repeat-containing protein.
       0.773
KRL11554.1
Cytosine deaminase.
 
    0.671
KRL10382.1
Phosphonate-transporting ATPase.
       0.528
KRL10383.1
ABC transporter.
       0.528
KRL10381.1
Metal ion ABC transporter.
       0.474
KRL10380.1
Hypothetical protein.
       0.442
pyrC
Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
  
 0.436
KRL10386.1
Fe(3+)-transporting ATPase.
       0.431
KRL10379.1
Hypothetical protein.
       0.422
KRL10387.1
ABC-2 type transporter.
       0.409
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.