STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL09863.1Polar amino acid ABC transporter inner membrane subunit. (234 aa)    
Predicted Functional Partners:
KRL09866.1
Phosphonate-transporting ATPase.
 0.996
KRL09865.1
ABC transporter periplasmic protein.
 
 0.995
KRL08617.1
Phosphonate-transporting ATPase.
 0.993
KRL08901.1
Phosphonate-transporting ATPase.
 0.992
KRL10472.1
Phosphonate-transporting ATPase.
 0.991
KRL09864.1
Polar amino acid ABC transporter inner membrane subunit.
 
 
 
0.975
KRL09022.1
ABC transporter periplasmic protein.
 0.967
KRL09021.1
Fe(3+)-transporting ATPase.
 0.962
KRL10471.1
Amino acid ABC transporter periplasmic protein.
 
 0.960
KRL09685.1
ABC transporter periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
 
  0.950
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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