STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL12637.1Hypothetical protein. (92 aa)    
Predicted Functional Partners:
KRL12638.1
Hypothetical protein.
 
     0.959
KRL12639.1
Nickase.
 
   
 0.891
KRL12634.1
Replication initiator protein.
  
     0.771
KRL12640.1
Topoisomerase.
 
     0.764
KRL12626.1
Plasmid replication initiation protein.
  
     0.720
KRL12635.1
DNA-damage-inducible protein.
  
     0.685
KRL11575.1
ABC transporter, ATP-binding protein.
      
 0.514
KRL12636.1
Hypothetical protein.
  
     0.446
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.