Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRL09004.1 | KRL09005.1 | FD05_GL001096 | FD05_GL001097 | UspA domain-containing protein. | Hypothetical protein. | 0.572 |
| KRL09004.1 | KRL09006.1 | FD05_GL001096 | FD05_GL001098 | UspA domain-containing protein. | AAA ATPase. | 0.431 |
| KRL09005.1 | KRL09004.1 | FD05_GL001097 | FD05_GL001096 | Hypothetical protein. | UspA domain-containing protein. | 0.572 |
| KRL09005.1 | KRL09006.1 | FD05_GL001097 | FD05_GL001098 | Hypothetical protein. | AAA ATPase. | 0.528 |
| KRL09006.1 | KRL09004.1 | FD05_GL001098 | FD05_GL001096 | AAA ATPase. | UspA domain-containing protein. | 0.431 |
| KRL09006.1 | KRL09005.1 | FD05_GL001098 | FD05_GL001097 | AAA ATPase. | Hypothetical protein. | 0.528 |
| KRL09006.1 | KRL09151.1 | FD05_GL001098 | FD05_GL001245 | AAA ATPase. | RecQ familyATP-dependent DNA helicase. | 0.585 |
| KRL09006.1 | KRL09936.1 | FD05_GL001098 | FD05_GL000923 | AAA ATPase. | ATP-dependent DNA helicase RecQ. | 0.585 |
| KRL09006.1 | KRL10853.1 | FD05_GL001098 | FD05_GL000001 | AAA ATPase. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.560 |
| KRL09006.1 | KRL11577.1 | FD05_GL001098 | FD05_GL002215 | AAA ATPase. | Appr-1-p processing protein. | 0.747 |
| KRL09006.1 | polA | FD05_GL001098 | FD05_GL001412 | AAA ATPase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.530 |
| KRL09006.1 | rpsD | FD05_GL001098 | FD05_GL001099 | AAA ATPase. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.577 |
| KRL09151.1 | KRL09006.1 | FD05_GL001245 | FD05_GL001098 | RecQ familyATP-dependent DNA helicase. | AAA ATPase. | 0.585 |
| KRL09151.1 | KRL10853.1 | FD05_GL001245 | FD05_GL000001 | RecQ familyATP-dependent DNA helicase. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.703 |
| KRL09151.1 | polA | FD05_GL001245 | FD05_GL001412 | RecQ familyATP-dependent DNA helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.921 |
| KRL09936.1 | KRL09006.1 | FD05_GL000923 | FD05_GL001098 | ATP-dependent DNA helicase RecQ. | AAA ATPase. | 0.585 |
| KRL09936.1 | KRL10853.1 | FD05_GL000923 | FD05_GL000001 | ATP-dependent DNA helicase RecQ. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.703 |
| KRL09936.1 | polA | FD05_GL000923 | FD05_GL001412 | ATP-dependent DNA helicase RecQ. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.921 |
| KRL10853.1 | KRL09006.1 | FD05_GL000001 | FD05_GL001098 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | AAA ATPase. | 0.560 |
| KRL10853.1 | KRL09151.1 | FD05_GL000001 | FD05_GL001245 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | RecQ familyATP-dependent DNA helicase. | 0.703 |
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