STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL09350.1Hypothetical protein. (183 aa)    
Predicted Functional Partners:
KRL09351.1
Peptidase S58 DmpA.
       0.773
KRL09352.1
Abortive infection protein.
       0.746
KRL09353.1
Peptidase S53.
       0.736
KRL10418.1
Hypothetical protein.
  
     0.728
KRL10936.1
Hypothetical protein.
  
     0.676
KRL10216.1
Hypothetical protein.
  
     0.605
KRL11028.1
Hypothetical protein.
  
     0.600
KRL09346.1
Beta-lactamase class A.
 
     0.596
KRL09354.1
Hypothetical protein.
       0.550
KRL08904.1
Peptidase M10A and M12B matrixin and adamalysin.
  
     0.537
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.