STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL12342.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
KRL12343.1
Phage major tail protein.
 
     0.965
KRL12341.1
Phage protein, HK97 gp10 family.
 
     0.963
KRL12337.1
Phage portal protein, HK97 family.
 
     0.869
KRL12339.1
Phage major capsid protein, HK97 family.
 
     0.868
KRL12336.1
Phage terminase, large subunit.
 
     0.849
KRL12335.1
Hypothetical protein.
 
     0.848
KRL12338.1
S14 family endopeptidase ClpP; Belongs to the peptidase S14 family.
 
     0.843
KRL12345.1
Tail protein.
 
     0.828
KRL12348.1
Phage minor structural protein.
 
     0.817
KRL12350.1
Hypothetical protein.
 
     0.800
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.