STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL08600.1Competence protein ComEA. (243 aa)    
Predicted Functional Partners:
KRL08602.1
DNA internalization-related competence protein ComEC Rec2.
 
  
 0.951
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
      0.899
KRL08599.1
Lon-like protease.
      0.892
KRL09446.1
Helicase domain-containing protein.
   
  
 0.865
KRL08601.1
ComE operon protein 2.
  
    0.863
KRL09062.1
Type II secretion system F domain-containing protein.
 
  
 0.815
KRL08603.1
DNA polymerase III subunit delta.
       0.750
KRL08597.1
Methyltransferase.
       0.719
KRL09027.1
CinA domain-containing protein; Belongs to the CinA family.
     
 0.706
KRL09061.1
Type II secretion system protein E.
  
  
 0.683
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
Server load: low (24%) [HD]