STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL11983.1Hypothetical protein. (417 aa)    
Predicted Functional Partners:
KRL11984.1
Hypothetical protein.
 
  
 0.976
KRL11982.1
Multi-sensor signal transduction histidine kinase.
 
  
 0.874
KRL11985.1
Beta-lactamase domain-containing protein.
  
  
 0.846
KRL09669.1
Hypothetical protein.
  
     0.755
KRL08574.1
Hypothetical protein.
  
     0.727
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
   
 0.709
KRL10146.1
Hypothetical protein.
  
     0.706
KRL09311.1
DnaD and phage-associated region.
  
     0.690
KRL11986.1
Peptidase S1 and S6 chymotrypsin Hap.
  
  
 0.669
KRL09919.1
Hypothetical protein.
  
     0.662
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.