STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL12009.1PTS system Galactitol-specific IIC component. (487 aa)    
Predicted Functional Partners:
KRL09950.1
3-oxoacyl-ACP reductase.
   
 
  0.991
gatA
glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
   
    0.987
KRL10122.1
Family 2 glycoside hydrolase.
   
    0.969
KRL11469.1
Amidase; Belongs to the amidase family.
   
    0.941
KRL09666.1
Phosphotransferase system, phosphocarrier protein HPr.
    
  0.931
KRL10983.1
L-threonine 3-dehydrogenase.
 
  0.799
KRL12039.1
Threonine dehydrogenase or related Zn-dependent dehydrogenase.
 
 
  0.769
KRL11582.1
L-iditol 2-dehydrogenase.
 
 
  0.742
KRL11495.1
Hypothetical protein.
   
    0.740
KRL12010.1
Amidohydrolase family superfamily.
       0.643
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.