STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL12010.1Amidohydrolase family superfamily. (324 aa)    
Predicted Functional Partners:
KRL11455.1
Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.805
KRL12008.1
Hypothetical protein.
 
     0.783
KRL12011.1
Glyoxylate reductase, NADH-dependent; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.754
KRL09688.1
Oxidoreductase domain-containing protein.
    
 0.710
KRL09348.1
Muconate cycloisomerase.
    
 0.662
KRL12009.1
PTS system Galactitol-specific IIC component.
       0.643
KRL12013.1
Hypothetical protein.
 
     0.517
KRL12012.1
Transcriptional regulator.
 
     0.509
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
  
 0.445
KRL12015.1
L-ribulose-5-phosphate 3-epimerase.
 
     0.402
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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