STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL12121.1Hypothetical protein. (726 aa)    
Predicted Functional Partners:
KRL10227.1
Hypothetical protein.
  
     0.763
KRL10932.1
CAAX amino terminal protease family protein.
  
     0.747
KRL12124.1
Hypothetical protein.
 
     0.727
KRL12122.1
Hypothetical protein.
       0.675
KRL12115.1
Hypothetical protein.
 
     0.609
KRL10367.1
Hypothetical protein.
 
     0.598
KRL12118.1
Transporter, major facilitator family protein.
  
     0.596
KRL10192.1
Hypothetical protein.
  
     0.594
KRL08777.1
Hypothetical protein.
  
     0.578
KRL08585.1
Helix-turn-helix domain-containing protein.
  
     0.573
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.