STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL11860.1NEAr transporter. (272 aa)    
Predicted Functional Partners:
KRL11861.1
LPXTG-motif cell wall anchor domain-containing protein.
 
  
 0.967
KRL11859.1
Heme ABC transporter heme-binding protein isdE.
 
  
 0.954
KRL11858.1
ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.943
KRL11857.1
Iron-chelate-transporting ATPase.
 
  
 0.922
KRL10904.1
Hypothetical protein.
  
     0.572
KRL08621.1
Hypothetical protein.
  
     0.558
KRL10301.1
Peptidoglycan-binding lysin domain-containing protein.
  
     0.509
KRL11519.1
Hypothetical protein.
  
     0.505
KRL10192.1
Hypothetical protein.
  
     0.496
KRL11514.1
Hypothetical protein.
 
  
 0.492
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.